Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 AC126365.1-201ENST00000578585 1514 ntBASIC20.08■□□□□ 0.81
MS4A1P11836 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.08■□□□□ 0.81
MS4A1P11836 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 AL359258.3-201ENST00000622910 2331 ntBASIC20.08■□□□□ 0.81
MS4A1P11836 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
MS4A1P11836 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.08■□□□□ 0.81
MS4A1P11836 TARDBPP1-201ENST00000442013 1203 ntBASIC20.08■□□□□ 0.81
MS4A1P11836 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.08■□□□□ 0.81
MS4A1P11836 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MS4A1P11836 HLA-V-204ENST00000476601 1289 ntBASIC20.08■□□□□ 0.81
MS4A1P11836 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.08■□□□□ 0.81
MS4A1P11836 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.08■□□□□ 0.81
MS4A1P11836 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MS4A1P11836 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC20.08■□□□□ 0.8
MS4A1P11836 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
MS4A1P11836 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MS4A1P11836 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
MS4A1P11836 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC20.08■□□□□ 0.8
MS4A1P11836 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
MS4A1P11836 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MS4A1P11836 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
MS4A1P11836 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC20.08■□□□□ 0.8
MS4A1P11836 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MS4A1P11836 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.07■□□□□ 0.8
MS4A1P11836 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MS4A1P11836 LINC00552-201ENST00000625151 2579 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MS4A1P11836 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC20.07■□□□□ 0.8
MS4A1P11836 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MS4A1P11836 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 AL080243.2-201ENST00000418783 582 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 CNN2P2-201ENST00000443536 909 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.07■□□□□ 0.8
MS4A1P11836 CNN2P3-201ENST00000450201 906 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.07■□□□□ 0.8
MS4A1P11836 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
MS4A1P11836 AC025678.2-201ENST00000562061 970 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.07■□□□□ 0.8
MS4A1P11836 AL136317.3-201ENST00000618497 906 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 AL033527.5-202ENST00000641632 1098 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 AC009090.5-201ENST00000624886 2285 ntBASIC20.07■□□□□ 0.8
MS4A1P11836 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.07■□□□□ 0.8
MS4A1P11836 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.07■□□□□ 0.8
MS4A1P11836 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
MS4A1P11836 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
MS4A1P11836 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MS4A1P11836 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
MS4A1P11836 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC20.06■□□□□ 0.8
MS4A1P11836 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.06■□□□□ 0.8
MS4A1P11836 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC20.06■□□□□ 0.8
MS4A1P11836 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
MS4A1P11836 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
MS4A1P11836 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.06■□□□□ 0.8
MS4A1P11836 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.06■□□□□ 0.8
MS4A1P11836 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.06■□□□□ 0.8
MS4A1P11836 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MS4A1P11836 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC20.06■□□□□ 0.8
MS4A1P11836 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MS4A1P11836 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms