Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.35■□□□□ 0.53
TOP1P11387 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.35■□□□□ 0.53
TOP1P11387 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TOP1P11387 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.34■□□□□ 0.53
TOP1P11387 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TOP1P11387 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TOP1P11387 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.34■□□□□ 0.53
TOP1P11387 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TOP1P11387 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TOP1P11387 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TOP1P11387 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TOP1P11387 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TOP1P11387 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TOP1P11387 AL133267.1-201ENST00000398220 340 ntBASIC18.34■□□□□ 0.53
TOP1P11387 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TOP1P11387 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.34■□□□□ 0.53
TOP1P11387 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.34■□□□□ 0.53
TOP1P11387 RN7SL752P-201ENST00000463779 287 ntBASIC18.34■□□□□ 0.53
TOP1P11387 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.34■□□□□ 0.53
TOP1P11387 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.34■□□□□ 0.53
TOP1P11387 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TOP1P11387 AC239800.4-201ENST00000603712 296 ntBASIC18.34■□□□□ 0.53
TOP1P11387 WFDC1-204ENST00000613603 549 ntBASIC18.34■□□□□ 0.53
TOP1P11387 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TOP1P11387 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TOP1P11387 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TOP1P11387 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TOP1P11387 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TOP1P11387 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TOP1P11387 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TOP1P11387 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.33■□□□□ 0.53
TOP1P11387 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TOP1P11387 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TOP1P11387 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TOP1P11387 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TOP1P11387 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TOP1P11387 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.33■□□□□ 0.52
TOP1P11387 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TOP1P11387 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.33■□□□□ 0.52
TOP1P11387 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TOP1P11387 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.33■□□□□ 0.52
TOP1P11387 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP1P11387 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 AC015910.1-201ENST00000579400 975 ntBASIC18.33■□□□□ 0.52
TOP1P11387 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP1P11387 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TOP1P11387 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP1P11387 BRI3BPP1-201ENST00000594224 787 ntBASIC18.33■□□□□ 0.52
TOP1P11387 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP1P11387 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.33■□□□□ 0.52
TOP1P11387 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP1P11387 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.33■□□□□ 0.52
TOP1P11387 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TOP1P11387 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.32■□□□□ 0.52
TOP1P11387 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.32■□□□□ 0.52
TOP1P11387 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TOP1P11387 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TOP1P11387 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TOP1P11387 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
TOP1P11387 AL442647.2-201ENST00000429864 857 ntBASIC18.32■□□□□ 0.52
TOP1P11387 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.32■□□□□ 0.52
TOP1P11387 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.32■□□□□ 0.52
TOP1P11387 INE1-201ENST00000456273 945 ntBASIC18.32■□□□□ 0.52
TOP1P11387 AC011495.1-201ENST00000498085 584 ntBASIC18.32■□□□□ 0.52
TOP1P11387 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.32■□□□□ 0.52
TOP1P11387 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.32■□□□□ 0.52
TOP1P11387 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
TOP1P11387 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TOP1P11387 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TOP1P11387 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TOP1P11387 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.32■□□□□ 0.52
TOP1P11387 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms