Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 MIR769-201ENST00000390225 118 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 AL139094.1-201ENST00000405549 1188 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 FXNP2-201ENST00000411625 547 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 AC245884.6-201ENST00000515672 1067 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 AC097724.1-201ENST00000609581 426 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 CU633904.3-201ENST00000624042 1029 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 PRSS30P-206ENST00000641773 873 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CSB-PGBD3P0DP91 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 MPRIPP1-201ENST00000452433 1089 ntBASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 OR10B1P-201ENST00000601666 907 ntBASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 AGGF1P2-201ENST00000426656 2106 ntBASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 KRT8P19-201ENST00000551916 1455 ntBASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CSB-PGBD3P0DP91 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 AL133466.1-201ENST00000447582 150 ntBASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 SPTLC1P5-201ENST00000450718 252 ntBASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 SERPINA13P-202ENST00000478994 924 ntBASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 MIR6727-201ENST00000620702 65 ntBASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 AC091812.3-201ENST00000621362 345 ntBASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CSB-PGBD3P0DP91 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms