Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 AL513190.1-201ENST00000621254 727 ntBASIC15.2■□□□□ 0.02
LINGO3P0C6S8 AC092865.6-201ENST00000642101 219 ntBASIC15.2■□□□□ 0.02
LINGO3P0C6S8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 PCGF3-213ENST00000620529 1899 ntBASIC15.2■□□□□ 0.02
LINGO3P0C6S8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINGO3P0C6S8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 PDPK2P-202ENST00000562415 1191 ntBASIC15.19■□□□□ 0.02
LINGO3P0C6S8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 AC020765.3-201ENST00000613051 740 ntBASIC15.19■□□□□ 0.02
LINGO3P0C6S8 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 AC073869.1-201ENST00000415574 2762 ntBASIC15.19■□□□□ 0.02
LINGO3P0C6S8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 C18orf15-201ENST00000623680 2534 ntBASIC15.19■□□□□ 0.02
LINGO3P0C6S8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LINGO3P0C6S8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.18■□□□□ 0.02
LINGO3P0C6S8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.18■□□□□ 0.02
LINGO3P0C6S8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms