Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
CLTAP09496 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLTAP09496 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLTAP09496 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.12■□□□□ 0.33
CLTAP09496 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.12■□□□□ 0.33
CLTAP09496 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.12■□□□□ 0.33
CLTAP09496 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.12■□□□□ 0.33
CLTAP09496 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.12■□□□□ 0.33
CLTAP09496 CHCHD2P3-201ENST00000603038 451 ntBASIC17.12■□□□□ 0.33
CLTAP09496 AL391069.4-201ENST00000609583 481 ntBASIC17.12■□□□□ 0.33
CLTAP09496 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.12■□□□□ 0.33
CLTAP09496 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLTAP09496 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLTAP09496 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.12■□□□□ 0.33
CLTAP09496 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLTAP09496 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLTAP09496 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.11■□□□□ 0.33
CLTAP09496 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.11■□□□□ 0.33
CLTAP09496 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.11■□□□□ 0.33
CLTAP09496 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.11■□□□□ 0.33
CLTAP09496 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.11■□□□□ 0.33
CLTAP09496 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.11■□□□□ 0.33
CLTAP09496 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.11■□□□□ 0.33
CLTAP09496 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CLTAP09496 AL158212.4-201ENST00000624062 1286 ntBASIC17.11■□□□□ 0.33
CLTAP09496 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.11■□□□□ 0.33
CLTAP09496 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLTAP09496 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.11■□□□□ 0.33
CLTAP09496 FLJ16779-201ENST00000612722 7638 ntBASIC17.11■□□□□ 0.33
CLTAP09496 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLTAP09496 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.1■□□□□ 0.33
CLTAP09496 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLTAP09496 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.1■□□□□ 0.33
CLTAP09496 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.1■□□□□ 0.33
CLTAP09496 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.1■□□□□ 0.33
CLTAP09496 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.1■□□□□ 0.33
CLTAP09496 AC025048.6-201ENST00000634326 1161 ntBASIC17.1■□□□□ 0.33
CLTAP09496 AC105233.6-201ENST00000642093 218 ntBASIC17.1■□□□□ 0.33
CLTAP09496 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
CLTAP09496 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CLTAP09496 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLTAP09496 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
CLTAP09496 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLTAP09496 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms