Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 AC009090.5-201ENST00000624886 2285 ntBASIC14.1□□□□□ -0.15
HLA-DQA2P01906 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 MKNK2P1-201ENST00000437526 628 ntBASIC14.1□□□□□ -0.15
HLA-DQA2P01906 PHKG1P2-201ENST00000457537 863 ntBASIC14.1□□□□□ -0.15
HLA-DQA2P01906 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 LINC01225-203ENST00000563550 1244 ntBASIC14.1□□□□□ -0.15
HLA-DQA2P01906 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DQA2P01906 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 C18orf15-201ENST00000623680 2534 ntBASIC14.09□□□□□ -0.15
HLA-DQA2P01906 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 TNRC18P2-201ENST00000417666 2714 ntBASIC14.09□□□□□ -0.15
HLA-DQA2P01906 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 ALG1L5P-201ENST00000482043 771 ntBASIC14.09□□□□□ -0.15
HLA-DQA2P01906 AC069335.1-201ENST00000489972 472 ntBASIC14.09□□□□□ -0.15
HLA-DQA2P01906 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 RARRES2P9-201ENST00000565168 469 ntBASIC14.09□□□□□ -0.15
HLA-DQA2P01906 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DQA2P01906 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DQA2P01906 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DQA2P01906 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DQA2P01906 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DQA2P01906 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DQA2P01906 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DQA2P01906 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms