Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
MBD4O95243 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
MBD4O95243 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.53■□□□□ 0.56
MBD4O95243 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
MBD4O95243 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 GK-202ENST00000378941 458 ntTSL 3 BASIC18.53■□□□□ 0.56
MBD4O95243 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.53■□□□□ 0.56
MBD4O95243 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.53■□□□□ 0.56
MBD4O95243 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MBD4O95243 AC093433.1-201ENST00000458048 571 ntBASIC18.53■□□□□ 0.56
MBD4O95243 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.53■□□□□ 0.56
MBD4O95243 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
MBD4O95243 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.53■□□□□ 0.56
MBD4O95243 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 HILS1-202ENST00000545329 423 ntBASIC18.53■□□□□ 0.56
MBD4O95243 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.53■□□□□ 0.56
MBD4O95243 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.53■□□□□ 0.56
MBD4O95243 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MBD4O95243 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.53■□□□□ 0.56
MBD4O95243 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.53■□□□□ 0.56
MBD4O95243 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.53■□□□□ 0.56
MBD4O95243 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.53■□□□□ 0.56
MBD4O95243 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MBD4O95243 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD4O95243 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MBD4O95243 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.52■□□□□ 0.56
MBD4O95243 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MBD4O95243 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.52■□□□□ 0.56
MBD4O95243 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.52■□□□□ 0.56
MBD4O95243 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MBD4O95243 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.52■□□□□ 0.56
MBD4O95243 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MBD4O95243 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MBD4O95243 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
MBD4O95243 AC112492.5-201ENST00000421897 457 ntBASIC18.52■□□□□ 0.56
MBD4O95243 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.52■□□□□ 0.56
MBD4O95243 AC068587.3-201ENST00000526613 355 ntBASIC18.52■□□□□ 0.56
MBD4O95243 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
MBD4O95243 KRT17P8-201ENST00000540749 863 ntBASIC18.52■□□□□ 0.56
MBD4O95243 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.52■□□□□ 0.56
MBD4O95243 AP001063.1-201ENST00000568332 529 ntBASIC18.52■□□□□ 0.56
MBD4O95243 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MBD4O95243 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.52■□□□□ 0.56
MBD4O95243 AL162274.1-201ENST00000617191 1098 ntBASIC18.52■□□□□ 0.56
MBD4O95243 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.52■□□□□ 0.56
MBD4O95243 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MBD4O95243 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MBD4O95243 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.52■□□□□ 0.56
MBD4O95243 AC011270.2-201ENST00000624293 2550 ntBASIC18.52■□□□□ 0.56
MBD4O95243 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MBD4O95243 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MBD4O95243 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MBD4O95243 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.52■□□□□ 0.55
MBD4O95243 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.52■□□□□ 0.55
MBD4O95243 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.52■□□□□ 0.55
MBD4O95243 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MBD4O95243 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.52■□□□□ 0.55
MBD4O95243 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.55
MBD4O95243 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MBD4O95243 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 AC136621.1-201ENST00000624017 2304 ntBASIC18.51■□□□□ 0.55
MBD4O95243 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.51■□□□□ 0.55
MBD4O95243 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.51■□□□□ 0.55
MBD4O95243 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
MBD4O95243 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MBD4O95243 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.51■□□□□ 0.55
MBD4O95243 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.51■□□□□ 0.55
MBD4O95243 OR8S1-201ENST00000310194 1080 ntBASIC18.51■□□□□ 0.55
MBD4O95243 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.51■□□□□ 0.55
MBD4O95243 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms