Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTN3O95197 AC000095.1-201ENST00000603208 874 ntBASIC16.49■□□□□ 0.23
RTN3O95197 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN3O95197 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN3O95197 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTN3O95197 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 AL121723.1-201ENST00000445194 1519 ntBASIC16.49■□□□□ 0.23
RTN3O95197 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
RTN3O95197 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN3O95197 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN3O95197 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RTN3O95197 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.49■□□□□ 0.23
RTN3O95197 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RTN3O95197 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RTN3O95197 AL122018.1-201ENST00000446607 2310 ntBASIC16.48■□□□□ 0.23
RTN3O95197 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RTN3O95197 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 INE1-201ENST00000456273 945 ntBASIC16.48■□□□□ 0.23
RTN3O95197 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.48■□□□□ 0.23
RTN3O95197 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RTN3O95197 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.48■□□□□ 0.23
RTN3O95197 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 BRI3BPP1-201ENST00000594224 787 ntBASIC16.48■□□□□ 0.23
RTN3O95197 WFDC1-204ENST00000613603 549 ntBASIC16.48■□□□□ 0.23
RTN3O95197 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.48■□□□□ 0.23
RTN3O95197 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.48■□□□□ 0.23
RTN3O95197 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RTN3O95197 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RTN3O95197 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN3O95197 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN3O95197 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RTN3O95197 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RTN3O95197 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 AL512384.1-201ENST00000406683 331 ntBASIC16.47■□□□□ 0.23
RTN3O95197 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
RTN3O95197 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.47■□□□□ 0.23
RTN3O95197 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.47■□□□□ 0.23
RTN3O95197 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.47■□□□□ 0.23
RTN3O95197 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.47■□□□□ 0.23
RTN3O95197 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.47■□□□□ 0.23
RTN3O95197 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.47■□□□□ 0.23
RTN3O95197 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.47■□□□□ 0.23
RTN3O95197 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.47■□□□□ 0.23
RTN3O95197 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.47■□□□□ 0.23
RTN3O95197 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.47■□□□□ 0.23
RTN3O95197 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.47■□□□□ 0.23
RTN3O95197 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RTN3O95197 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.47■□□□□ 0.23
RTN3O95197 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RTN3O95197 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RTN3O95197 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
RTN3O95197 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RTN3O95197 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RTN3O95197 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.46■□□□□ 0.23
RTN3O95197 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RTN3O95197 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms