Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX2-2O95096 RARRES2P5-201ENST00000564013 466 ntBASIC14.38□□□□□ -0.11
NKX2-2O95096 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX2-2O95096 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NKX2-2O95096 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX2-2O95096 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX2-2O95096 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX2-2O95096 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
NKX2-2O95096 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NKX2-2O95096 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX2-2O95096 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX2-2O95096 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NKX2-2O95096 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.38□□□□□ -0.11
NKX2-2O95096 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX2-2O95096 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX2-2O95096 MST1L-201ENST00000442552 2185 ntBASIC14.37□□□□□ -0.11
NKX2-2O95096 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NKX2-2O95096 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX2-2O95096 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.37□□□□□ -0.11
NKX2-2O95096 INGX-202ENST00000489074 768 ntBASIC14.37□□□□□ -0.11
NKX2-2O95096 DOC2GP-202ENST00000514950 1163 ntBASIC14.37□□□□□ -0.11
NKX2-2O95096 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.37□□□□□ -0.11
NKX2-2O95096 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.37□□□□□ -0.11
NKX2-2O95096 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.37□□□□□ -0.11
NKX2-2O95096 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.37□□□□□ -0.11
NKX2-2O95096 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX2-2O95096 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 AC091951.1-201ENST00000512854 2465 ntBASIC14.37□□□□□ -0.11
NKX2-2O95096 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX2-2O95096 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NKX2-2O95096 CLK3P2-201ENST00000427566 1453 ntBASIC14.37□□□□□ -0.11
NKX2-2O95096 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.37□□□□□ -0.11
NKX2-2O95096 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.37□□□□□ -0.11
NKX2-2O95096 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NKX2-2O95096 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX2-2O95096 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NKX2-2O95096 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX2-2O95096 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX2-2O95096 TPRX2P-201ENST00000535362 881 ntBASIC14.36□□□□□ -0.11
NKX2-2O95096 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
NKX2-2O95096 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX2-2O95096 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX2-2O95096 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms