Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 AC022532.1-201ENST00000624563 1728 ntBASIC16.39■□□□□ 0.21
OPHN1O60890 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
OPHN1O60890 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 BNIP3P1-202ENST00000550043 1585 ntBASIC16.38■□□□□ 0.21
OPHN1O60890 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 AC126177.1-201ENST00000547829 2218 ntBASIC16.38■□□□□ 0.21
OPHN1O60890 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
OPHN1O60890 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.38■□□□□ 0.21
OPHN1O60890 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.38■□□□□ 0.21
OPHN1O60890 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.38■□□□□ 0.21
OPHN1O60890 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 HLA-V-204ENST00000476601 1289 ntBASIC16.38■□□□□ 0.21
OPHN1O60890 IGHV3-71-201ENST00000523324 359 ntBASIC16.38■□□□□ 0.21
OPHN1O60890 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.38■□□□□ 0.21
OPHN1O60890 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 AC007967.4-201ENST00000614700 386 ntBASIC16.38■□□□□ 0.21
OPHN1O60890 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.38■□□□□ 0.21
OPHN1O60890 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.38■□□□□ 0.21
OPHN1O60890 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
OPHN1O60890 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
OPHN1O60890 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.38■□□□□ 0.21
OPHN1O60890 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
OPHN1O60890 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.37■□□□□ 0.21
OPHN1O60890 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
OPHN1O60890 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
OPHN1O60890 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
OPHN1O60890 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.37■□□□□ 0.21
OPHN1O60890 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
OPHN1O60890 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.37■□□□□ 0.21
OPHN1O60890 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.37■□□□□ 0.21
OPHN1O60890 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.37■□□□□ 0.21
OPHN1O60890 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.37■□□□□ 0.21
OPHN1O60890 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.37■□□□□ 0.21
OPHN1O60890 TP53TG3HP-202ENST00000569755 579 ntBASIC16.37■□□□□ 0.21
OPHN1O60890 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.37■□□□□ 0.21
OPHN1O60890 AC026979.3-201ENST00000607315 403 ntBASIC16.37■□□□□ 0.21
OPHN1O60890 AP3S2-216ENST00000617003 1561 ntBASIC16.37■□□□□ 0.21
OPHN1O60890 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.37■□□□□ 0.21
OPHN1O60890 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.37■□□□□ 0.21
OPHN1O60890 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
OPHN1O60890 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
OPHN1O60890 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
OPHN1O60890 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
OPHN1O60890 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
OPHN1O60890 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms