Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.68□□□□□ -0.06
HCN1O60741 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.68□□□□□ -0.06
HCN1O60741 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.68□□□□□ -0.06
HCN1O60741 AL079307.3-201ENST00000556114 283 ntBASIC14.68□□□□□ -0.06
HCN1O60741 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.68□□□□□ -0.06
HCN1O60741 LINC02560-201ENST00000596379 459 ntBASIC14.68□□□□□ -0.06
HCN1O60741 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.68□□□□□ -0.06
HCN1O60741 AL133215.2-201ENST00000609242 977 ntBASIC14.68□□□□□ -0.06
HCN1O60741 TEX28P1-201ENST00000613479 1221 ntBASIC14.68□□□□□ -0.06
HCN1O60741 TEX28P2-201ENST00000617764 1221 ntBASIC14.68□□□□□ -0.06
HCN1O60741 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HCN1O60741 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.68□□□□□ -0.06
HCN1O60741 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HCN1O60741 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HCN1O60741 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HCN1O60741 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
HCN1O60741 AC011477.6-201ENST00000604980 1927 ntBASIC14.68□□□□□ -0.06
HCN1O60741 PPT1-215ENST00000641471 2368 ntBASIC14.68□□□□□ -0.06
HCN1O60741 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HCN1O60741 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HCN1O60741 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HCN1O60741 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HCN1O60741 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.68□□□□□ -0.06
HCN1O60741 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HCN1O60741 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HCN1O60741 AP003680.1-201ENST00000598970 3660 ntBASIC14.68□□□□□ -0.06
HCN1O60741 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
HCN1O60741 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HCN1O60741 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HCN1O60741 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.67□□□□□ -0.06
HCN1O60741 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.67□□□□□ -0.06
HCN1O60741 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.67□□□□□ -0.06
HCN1O60741 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.67□□□□□ -0.06
HCN1O60741 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.67□□□□□ -0.06
HCN1O60741 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.67□□□□□ -0.06
HCN1O60741 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.67□□□□□ -0.06
HCN1O60741 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.67□□□□□ -0.06
HCN1O60741 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.67□□□□□ -0.06
HCN1O60741 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.67□□□□□ -0.06
HCN1O60741 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
HCN1O60741 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HCN1O60741 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.67□□□□□ -0.06
HCN1O60741 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HCN1O60741 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HCN1O60741 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.67□□□□□ -0.06
HCN1O60741 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
HCN1O60741 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HCN1O60741 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
HCN1O60741 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HCN1O60741 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 OR2I1P-209ENST00000641730 5365 ntBASIC14.66□□□□□ -0.06
HCN1O60741 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HCN1O60741 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HCN1O60741 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.66□□□□□ -0.06
HCN1O60741 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HCN1O60741 RPL37AP1-201ENST00000412502 279 ntBASIC14.66□□□□□ -0.06
HCN1O60741 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.66□□□□□ -0.06
HCN1O60741 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.66□□□□□ -0.06
HCN1O60741 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 SERBP1P3-201ENST00000459980 809 ntBASIC14.66□□□□□ -0.06
HCN1O60741 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.66□□□□□ -0.06
HCN1O60741 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.66□□□□□ -0.06
HCN1O60741 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.66□□□□□ -0.06
HCN1O60741 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.66□□□□□ -0.06
HCN1O60741 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.66□□□□□ -0.06
HCN1O60741 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.66□□□□□ -0.06
HCN1O60741 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.66□□□□□ -0.06
HCN1O60741 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.66□□□□□ -0.06
HCN1O60741 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HCN1O60741 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HCN1O60741 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms