Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AL133267.1-201ENST00000398220 340 ntBASIC13.93□□□□□ -0.18
TRAF3IP2O43734 MRPS18AP1-201ENST00000414458 589 ntBASIC13.93□□□□□ -0.18
TRAF3IP2O43734 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 KRT18P43-201ENST00000469825 1281 ntBASIC13.93□□□□□ -0.18
TRAF3IP2O43734 SPDYE18-201ENST00000510091 1050 ntBASIC13.93□□□□□ -0.18
TRAF3IP2O43734 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 KRT8P44-201ENST00000441609 1350 ntBASIC13.93□□□□□ -0.18
TRAF3IP2O43734 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAF3IP2O43734 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AL121723.1-201ENST00000445194 1519 ntBASIC13.92□□□□□ -0.18
TRAF3IP2O43734 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 RPL5P21-201ENST00000404620 815 ntBASIC13.92□□□□□ -0.18
TRAF3IP2O43734 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AL512638.1-201ENST00000457493 794 ntBASIC13.92□□□□□ -0.18
TRAF3IP2O43734 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AC135586.1-201ENST00000539323 574 ntBASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AC138969.3-201ENST00000546612 1459 ntBASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AC138932.2-201ENST00000548268 1459 ntBASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AC126755.4-201ENST00000549796 1459 ntBASIC13.92□□□□□ -0.18
TRAF3IP2O43734 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 AC006486.2-201ENST00000624246 2199 ntBASIC13.92□□□□□ -0.18
TRAF3IP2O43734 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF3IP2O43734 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF3IP2O43734 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF3IP2O43734 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAF3IP2O43734 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF3IP2O43734 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms