Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.59■□□□□ 0.09
PHGDHO43175 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.59■□□□□ 0.09
PHGDHO43175 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.59■□□□□ 0.09
PHGDHO43175 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.59■□□□□ 0.09
PHGDHO43175 HIST3H2BA-201ENST00000436555 524 ntBASIC15.59■□□□□ 0.09
PHGDHO43175 SPDYE14P-201ENST00000442619 822 ntBASIC15.59■□□□□ 0.09
PHGDHO43175 DNAJB3-201ENST00000446806 729 ntBASIC15.59■□□□□ 0.09
PHGDHO43175 YBX1P5-201ENST00000509441 847 ntBASIC15.59■□□□□ 0.09
PHGDHO43175 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.59■□□□□ 0.09
PHGDHO43175 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.59■□□□□ 0.09
PHGDHO43175 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.59■□□□□ 0.09
PHGDHO43175 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
PHGDHO43175 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.59■□□□□ 0.09
PHGDHO43175 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PHGDHO43175 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.59■□□□□ 0.09
PHGDHO43175 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.59■□□□□ 0.09
PHGDHO43175 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.59■□□□□ 0.09
PHGDHO43175 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PHGDHO43175 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PHGDHO43175 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.58■□□□□ 0.09
PHGDHO43175 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.58■□□□□ 0.09
PHGDHO43175 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.58■□□□□ 0.09
PHGDHO43175 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PHGDHO43175 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
PHGDHO43175 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.58■□□□□ 0.08
PHGDHO43175 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.58■□□□□ 0.08
PHGDHO43175 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.58■□□□□ 0.08
PHGDHO43175 AC010327.4-202ENST00000591484 748 ntBASIC15.58■□□□□ 0.08
PHGDHO43175 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.58■□□□□ 0.08
PHGDHO43175 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 MIR600HG-201ENST00000449175 5984 ntBASIC15.58■□□□□ 0.08
PHGDHO43175 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
PHGDHO43175 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.58■□□□□ 0.08
PHGDHO43175 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PHGDHO43175 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PHGDHO43175 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.58■□□□□ 0.08
PHGDHO43175 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.57■□□□□ 0.08
PHGDHO43175 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.57■□□□□ 0.08
PHGDHO43175 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 MTND6P24-201ENST00000440466 518 ntBASIC15.57■□□□□ 0.08
PHGDHO43175 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.57■□□□□ 0.08
PHGDHO43175 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.57■□□□□ 0.08
PHGDHO43175 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.57■□□□□ 0.08
PHGDHO43175 AC026150.2-201ENST00000564693 1156 ntBASIC15.57■□□□□ 0.08
PHGDHO43175 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PHGDHO43175 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
PHGDHO43175 AL133215.2-201ENST00000609242 977 ntBASIC15.57■□□□□ 0.08
PHGDHO43175 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms