Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ATP2A1O14983 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP2A1O14983 AC145423.3-201ENST00000615987 467 ntBASIC17.79■□□□□ 0.44
ATP2A1O14983 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ATP2A1O14983 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP2A1O14983 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ATP2A1O14983 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP2A1O14983 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.78■□□□□ 0.44
ATP2A1O14983 KRT8P35-201ENST00000483942 1338 ntBASIC17.78■□□□□ 0.44
ATP2A1O14983 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
ATP2A1O14983 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.78■□□□□ 0.44
ATP2A1O14983 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATP2A1O14983 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 NUS1P3-201ENST00000423502 862 ntBASIC17.78■□□□□ 0.44
ATP2A1O14983 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP2A1O14983 AC114812.1-204ENST00000449669 728 ntBASIC17.78■□□□□ 0.44
ATP2A1O14983 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP2A1O14983 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.78■□□□□ 0.44
ATP2A1O14983 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP2A1O14983 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.78■□□□□ 0.44
ATP2A1O14983 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP2A1O14983 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP2A1O14983 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.78■□□□□ 0.44
ATP2A1O14983 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATP2A1O14983 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ATP2A1O14983 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATP2A1O14983 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATP2A1O14983 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 PCDHB19P-201ENST00000570871 2371 ntBASIC17.77■□□□□ 0.44
ATP2A1O14983 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP2A1O14983 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ATP2A1O14983 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ATP2A1O14983 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 AC006449.5-201ENST00000610658 2098 ntBASIC17.77■□□□□ 0.44
ATP2A1O14983 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP2A1O14983 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.77■□□□□ 0.44
ATP2A1O14983 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 CD8B2-202ENST00000417670 633 ntBASIC17.77■□□□□ 0.44
ATP2A1O14983 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.77■□□□□ 0.44
ATP2A1O14983 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP2A1O14983 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.77■□□□□ 0.44
ATP2A1O14983 FAM8A2P-201ENST00000528813 1142 ntBASIC17.77■□□□□ 0.44
ATP2A1O14983 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.77■□□□□ 0.44
ATP2A1O14983 AC023310.1-201ENST00000554836 735 ntBASIC17.77■□□□□ 0.44
ATP2A1O14983 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.77■□□□□ 0.44
ATP2A1O14983 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.77■□□□□ 0.44
ATP2A1O14983 AC010328.2-201ENST00000597698 1111 ntBASIC17.77■□□□□ 0.44
ATP2A1O14983 AL645728.2-202ENST00000641679 227 ntBASIC17.77■□□□□ 0.44
ATP2A1O14983 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ATP2A1O14983 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ATP2A1O14983 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ATP2A1O14983 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.77■□□□□ 0.43
ATP2A1O14983 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP2A1O14983 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ATP2A1O14983 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ATP2A1O14983 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
ATP2A1O14983 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms