Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN5O00501 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN5O00501 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN5O00501 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN5O00501 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLDN5O00501 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN5O00501 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN5O00501 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 AL162726.2-201ENST00000438986 1017 ntBASIC16.41■□□□□ 0.22
CLDN5O00501 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN5O00501 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN5O00501 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN5O00501 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 AC020658.6-201ENST00000623564 1870 ntBASIC16.41■□□□□ 0.22
CLDN5O00501 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN5O00501 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN5O00501 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CLDN5O00501 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN5O00501 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.4■□□□□ 0.22
CLDN5O00501 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN5O00501 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN5O00501 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 U91328.1-201ENST00000437528 223 ntBASIC16.4■□□□□ 0.22
CLDN5O00501 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN5O00501 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN5O00501 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.4■□□□□ 0.22
CLDN5O00501 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN5O00501 CLUHP6-201ENST00000580789 941 ntBASIC16.4■□□□□ 0.22
CLDN5O00501 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CLDN5O00501 AC008735.3-201ENST00000596646 500 ntBASIC16.4■□□□□ 0.22
CLDN5O00501 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN5O00501 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN5O00501 AC005252.2-201ENST00000624630 1141 ntBASIC16.4■□□□□ 0.22
CLDN5O00501 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN5O00501 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN5O00501 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN5O00501 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLDN5O00501 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.39■□□□□ 0.22
CLDN5O00501 MSTO2P-201ENST00000314835 1709 ntBASIC16.39■□□□□ 0.21
CLDN5O00501 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLDN5O00501 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN5O00501 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLDN5O00501 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLDN5O00501 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CLDN5O00501 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CLDN5O00501 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.39■□□□□ 0.21
CLDN5O00501 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN5O00501 AC007389.4-201ENST00000454674 793 ntBASIC16.39■□□□□ 0.21
CLDN5O00501 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CLDN5O00501 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN5O00501 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.39■□□□□ 0.21
CLDN5O00501 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN5O00501 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN5O00501 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN5O00501 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN5O00501 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.39■□□□□ 0.21
CLDN5O00501 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLDN5O00501 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms