Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXN3O00409 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
FOXN3O00409 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXN3O00409 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXN3O00409 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXN3O00409 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FOXN3O00409 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FOXN3O00409 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FOXN3O00409 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXN3O00409 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXN3O00409 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXN3O00409 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 ZNF890P-202ENST00000530367 1156 ntBASIC16.71■□□□□ 0.27
FOXN3O00409 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXN3O00409 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXN3O00409 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
FOXN3O00409 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FOXN3O00409 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXN3O00409 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
FOXN3O00409 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FOXN3O00409 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXN3O00409 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXN3O00409 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXN3O00409 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
FOXN3O00409 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXN3O00409 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
FOXN3O00409 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXN3O00409 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXN3O00409 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 AL133267.1-201ENST00000398220 340 ntBASIC16.7■□□□□ 0.26
FOXN3O00409 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
FOXN3O00409 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.7■□□□□ 0.26
FOXN3O00409 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.7■□□□□ 0.26
FOXN3O00409 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
FOXN3O00409 AC009407.1-201ENST00000568958 598 ntBASIC16.7■□□□□ 0.26
FOXN3O00409 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.7■□□□□ 0.26
FOXN3O00409 AC006538.3-201ENST00000612495 578 ntBASIC16.7■□□□□ 0.26
FOXN3O00409 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
FOXN3O00409 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXN3O00409 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXN3O00409 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FOXN3O00409 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXN3O00409 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 MROH4P-201ENST00000431302 1578 ntBASIC16.69■□□□□ 0.26
FOXN3O00409 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
FOXN3O00409 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
FOXN3O00409 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms