Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 CICP24-201ENST00000605464 2705 ntBASIC12.6□□□□□ -0.39
SRRM4A7MD48 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.6□□□□□ -0.39
SRRM4A7MD48 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 MIR6069-201ENST00000620069 79 ntBASIC12.6□□□□□ -0.39
SRRM4A7MD48 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 AL033527.5-202ENST00000641632 1098 ntBASIC12.6□□□□□ -0.39
SRRM4A7MD48 AC067930.6-201ENST00000623257 4947 ntBASIC12.6□□□□□ -0.39
SRRM4A7MD48 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 AC084364.1-201ENST00000551967 1556 ntBASIC12.6□□□□□ -0.39
SRRM4A7MD48 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SRRM4A7MD48 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.6□□□□□ -0.39
SRRM4A7MD48 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 Z97205.2-201ENST00000564697 1639 ntBASIC12.59□□□□□ -0.39
SRRM4A7MD48 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 CICP11-201ENST00000434745 2827 ntBASIC12.59□□□□□ -0.39
SRRM4A7MD48 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 KRT18P13-201ENST00000400056 1290 ntBASIC12.59□□□□□ -0.39
SRRM4A7MD48 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SRRM4A7MD48 LINC00528-201ENST00000600723 2160 ntBASIC12.59□□□□□ -0.39
SRRM4A7MD48 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SRRM4A7MD48 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms