Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 LINC02199-201ENST00000506655 2702 ntBASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TBC1D3FA6NER0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 C2orf27AP3-201ENST00000434123 579 ntBASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 CSF2RBP1-201ENST00000447905 391 ntBASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 AC092658.1-201ENST00000505836 891 ntBASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 AL354718.3-201ENST00000616414 581 ntBASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 CR382287.1-201ENST00000623954 586 ntBASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 TNRC18P3-201ENST00000441896 2691 ntBASIC15.51■□□□□ 0.07
TBC1D3FA6NER0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 AC099336.1-201ENST00000417053 1171 ntBASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 AC022137.2-201ENST00000503482 481 ntBASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 AL138799.1-201ENST00000448213 1675 ntBASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 DOC2GP-204ENST00000639052 2548 ntBASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TBC1D3FA6NER0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms