Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 AL118508.1-201ENST00000613502 2345 ntBASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 KRT8P35-201ENST00000483942 1338 ntBASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 AC023310.1-201ENST00000554836 735 ntBASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 AC025279.2-201ENST00000569730 653 ntBASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 AC145423.3-201ENST00000615987 467 ntBASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TBC1D3BA6NDS4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 CNN2P8-201ENST00000421872 913 ntBASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 PFN1P12-201ENST00000455938 534 ntBASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 GPR182-203ENST00000622922 591 ntBASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 AC008687.7-202ENST00000637404 953 ntBASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TBC1D3BA6NDS4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms