Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 KRT8P23-201ENST00000560090 1207 ntBASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 AC061975.2-201ENST00000581722 295 ntBASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
HTR3EA5X5Y0 AC006504.5-208ENST00000588784 2401 ntBASIC14.58□□□□□ -0.07
HTR3EA5X5Y0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HTR3EA5X5Y0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HTR3EA5X5Y0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
HTR3EA5X5Y0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HTR3EA5X5Y0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
HTR3EA5X5Y0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
HTR3EA5X5Y0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 AC007967.2-201ENST00000432613 625 ntBASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 ACTG1P14-201ENST00000446382 1122 ntBASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 AC106730.1-201ENST00000566722 1090 ntBASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 AC099522.2-201ENST00000607001 744 ntBASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 BEND3P1-201ENST00000421591 1944 ntBASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 OR2I1P-210ENST00000642037 4691 ntBASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 AL691432.1-201ENST00000596308 1422 ntBASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
HTR3EA5X5Y0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 AL590627.1-203ENST00000421194 1026 ntBASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 AL671277.1-201ENST00000429656 993 ntBASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 FDX1P1-201ENST00000449115 551 ntBASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 KRT18P3-201ENST00000451602 1288 ntBASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.57□□□□□ -0.08
HTR3EA5X5Y0 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms