Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 AC233724.13-201ENST00000598383 410 ntBASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 AL512343.1-201ENST00000605837 169 ntBASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 AC107373.2-201ENST00000607735 490 ntBASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00588Q9Y4M8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 AC018665.1-201ENST00000622927 1362 ntBASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 AC009486.1-201ENST00000569860 813 ntBASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 CLUHP6-201ENST00000580789 941 ntBASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 AC093813.1-201ENST00000605066 256 ntBASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 MIR6805-201ENST00000615055 62 ntBASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00588Q9Y4M8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms