Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRAF6Q9Y4K3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAF6Q9Y4K3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAF6Q9Y4K3 AC232323.1-201ENST00000540724 2099 ntBASIC15.28■□□□□ 0.04
TRAF6Q9Y4K3 REXO1L5P-201ENST00000622260 2098 ntBASIC15.28■□□□□ 0.04
TRAF6Q9Y4K3 LINC00552-201ENST00000625151 2579 ntBASIC15.28■□□□□ 0.04
TRAF6Q9Y4K3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 UXT-AS1-201ENST00000590504 1525 ntBASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 RPL5P21-201ENST00000404620 815 ntBASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 SLC25A39P2-201ENST00000537614 270 ntBASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF6Q9Y4K3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 AC026748.1-201ENST00000624349 3251 ntBASIC15.27■□□□□ 0.03
TRAF6Q9Y4K3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 RARRES2P9-201ENST00000565168 469 ntBASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 AC120114.3-201ENST00000611923 658 ntBASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF6Q9Y4K3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms