Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 AC091951.1-201ENST00000512854 2465 ntBASIC12.69□□□□□ -0.38
FOXA2Q9Y261 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FOXA2Q9Y261 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 AC092183.1-201ENST00000469884 875 ntBASIC12.68□□□□□ -0.38
FOXA2Q9Y261 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 HNRNPUP1-201ENST00000554987 333 ntBASIC12.68□□□□□ -0.38
FOXA2Q9Y261 MIR4453-201ENST00000584019 89 ntBASIC12.68□□□□□ -0.38
FOXA2Q9Y261 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 Z92544.3-201ENST00000624747 417 ntBASIC12.68□□□□□ -0.38
FOXA2Q9Y261 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 AP002414.2-201ENST00000591780 3365 ntBASIC12.68□□□□□ -0.38
FOXA2Q9Y261 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FOXA2Q9Y261 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FOXA2Q9Y261 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms