Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
FOXD3Q9UJU5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 TSPY26P-202ENST00000565928 3884 ntBASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AC022210.1-201ENST00000449856 793 ntBASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AC133539.2-201ENST00000604757 467 ntBASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 AC127383.1-201ENST00000444697 1800 ntBASIC13.97□□□□□ -0.17
FOXD3Q9UJU5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 AC090616.6-203ENST00000579186 1945 ntBASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 AC098850.1-201ENST00000419919 790 ntBASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.96□□□□□ -0.17
FOXD3Q9UJU5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms