Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
HDAC6Q9UBN7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 AC022494.1-201ENST00000466044 728 ntBASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 USP32P1-208ENST00000506594 1164 ntBASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 AP005482.1-201ENST00000563722 1273 ntBASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 BTNL10-201ENST00000595971 695 ntBASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 TNRC18P2-201ENST00000417666 2714 ntBASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HDAC6Q9UBN7 LINC02447-202ENST00000501888 2146 ntBASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 ANKRD19P-201ENST00000338192 862 ntBASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 AL442647.2-201ENST00000429864 857 ntBASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 KRT223P-202ENST00000449164 1292 ntBASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 AC133552.6-201ENST00000613406 534 ntBASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 PPT1-215ENST00000641471 2368 ntBASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
HDAC6Q9UBN7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 KRT8P22-201ENST00000562317 1415 ntBASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HDAC6Q9UBN7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms