Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AC234783.1-201ENST00000441761 496 ntBASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AC068587.3-201ENST00000526613 355 ntBASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 PTP4A1P2-201ENST00000546033 454 ntBASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AC093813.1-201ENST00000605066 256 ntBASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AL512343.1-201ENST00000605837 169 ntBASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AC010491.1-201ENST00000563101 2797 ntBASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLCF1Q9UBD9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AC018665.1-201ENST00000622927 1362 ntBASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SLC25A47P1-201ENST00000531577 414 ntBASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AP001063.1-201ENST00000568332 529 ntBASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AC009486.1-201ENST00000569860 813 ntBASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 MIR6805-201ENST00000615055 62 ntBASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCF1Q9UBD9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms