Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
NCDNQ9UBB6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCDNQ9UBB6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCDNQ9UBB6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.46■□□□□ 0.06
NCDNQ9UBB6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NCDNQ9UBB6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
NCDNQ9UBB6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
NCDNQ9UBB6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.46■□□□□ 0.06
NCDNQ9UBB6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 CD8B2-202ENST00000417670 633 ntBASIC15.45■□□□□ 0.06
NCDNQ9UBB6 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.45■□□□□ 0.06
NCDNQ9UBB6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 AC104784.1-201ENST00000473096 294 ntBASIC15.45■□□□□ 0.06
NCDNQ9UBB6 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NCDNQ9UBB6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AL138709.1-201ENST00000614840 1693 ntBASIC15.44■□□□□ 0.06
NCDNQ9UBB6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AC079178.1-201ENST00000420915 656 ntBASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AC007274.2-201ENST00000421675 662 ntBASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 NKAIN1P1-201ENST00000435754 582 ntBASIC15.44■□□□□ 0.06
NCDNQ9UBB6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NCDNQ9UBB6 SERPINA13P-202ENST00000478994 924 ntBASIC15.44■□□□□ 0.06
NCDNQ9UBB6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 238.6 ms