Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC010327.5-201ENST00000586923 3061 ntBASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 AL591424.1-201ENST00000442569 1213 ntBASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 AC004877.2-201ENST00000623941 599 ntBASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.71□□□□□ -0.21
PCDHB16Q9NRJ7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.71□□□□□ -0.22
PCDHB16Q9NRJ7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCDHB16Q9NRJ7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCDHB16Q9NRJ7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCDHB16Q9NRJ7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCDHB16Q9NRJ7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCDHB16Q9NRJ7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCDHB16Q9NRJ7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.71□□□□□ -0.22
PCDHB16Q9NRJ7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 IL9RP2-201ENST00000423948 1312 ntBASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 AC068137.2-201ENST00000605408 478 ntBASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 AC120114.3-201ENST00000611923 658 ntBASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 CICP24-201ENST00000605464 2705 ntBASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDHB16Q9NRJ7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCDHB16Q9NRJ7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCDHB16Q9NRJ7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCDHB16Q9NRJ7 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms