Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 AC023024.2-201ENST00000623561 1993 ntBASIC16.11■□□□□ 0.17
USP29Q9HBJ7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
USP29Q9HBJ7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AGAP7P-201ENST00000582299 2062 ntBASIC16.1■□□□□ 0.17
USP29Q9HBJ7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AGAP14-201ENST00000624701 2060 ntBASIC16.1■□□□□ 0.17
USP29Q9HBJ7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AC148477.4-201ENST00000613430 1793 ntBASIC16.1■□□□□ 0.17
USP29Q9HBJ7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AL080243.2-201ENST00000418783 582 ntBASIC16.1■□□□□ 0.17
USP29Q9HBJ7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.1■□□□□ 0.17
USP29Q9HBJ7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 AP002414.2-201ENST00000591780 3365 ntBASIC16.1■□□□□ 0.17
USP29Q9HBJ7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.1■□□□□ 0.17
USP29Q9HBJ7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 AC022144.1-201ENST00000602255 1580 ntBASIC16.09■□□□□ 0.17
USP29Q9HBJ7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 RPL37AP1-201ENST00000412502 279 ntBASIC16.09■□□□□ 0.17
USP29Q9HBJ7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 AL589739.1-201ENST00000607720 493 ntBASIC16.09■□□□□ 0.17
USP29Q9HBJ7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
USP29Q9HBJ7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms