Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC68Q9H2F9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AC105250.1-201ENST00000509378 2057 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AP006288.1-201ENST00000446065 395 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AC004967.1-201ENST00000453589 447 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 RN7SL828P-201ENST00000607615 303 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AP001059.3-201ENST00000619053 235 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AC134684.3-201ENST00000641758 218 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 AC079781.4-201ENST00000641908 219 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.75■□□□□ 0.11
CCDC68Q9H2F9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 MIR4453-201ENST00000584019 89 ntBASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 AL596442.2-201ENST00000610240 980 ntBASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.74■□□□□ 0.11
CCDC68Q9H2F9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms