Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
BHLHE41Q9C0J9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BHLHE41Q9C0J9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 BX842568.4-201ENST00000421222 227 ntBASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 AL079307.3-201ENST00000556114 283 ntBASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 MIR4453-201ENST00000584019 89 ntBASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 MIR6080-201ENST00000617359 66 ntBASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 AP001059.3-201ENST00000619053 235 ntBASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BHLHE41Q9C0J9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 UPF3AP3-201ENST00000420996 769 ntBASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 AC092865.5-201ENST00000545435 363 ntBASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 MIR6069-201ENST00000620069 79 ntBASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.82□□□□□ -0.04
BHLHE41Q9C0J9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms