Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 ZBED1P1-201ENST00000502364 1930 ntBASIC12.73□□□□□ -0.37
NKX6-2Q9C056 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 YBX1P2-201ENST00000489612 999 ntBASIC12.73□□□□□ -0.37
NKX6-2Q9C056 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 AC020765.3-201ENST00000613051 740 ntBASIC12.73□□□□□ -0.37
NKX6-2Q9C056 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 SNX33P1-201ENST00000592116 1762 ntBASIC12.73□□□□□ -0.37
NKX6-2Q9C056 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NKX6-2Q9C056 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 LINC00982-205ENST00000420957 435 ntBASIC12.72□□□□□ -0.37
NKX6-2Q9C056 TSPY22P-201ENST00000427496 604 ntBASIC12.72□□□□□ -0.37
NKX6-2Q9C056 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 AC112907.2-201ENST00000448639 330 ntBASIC12.72□□□□□ -0.37
NKX6-2Q9C056 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 VENTXP5-201ENST00000523979 775 ntBASIC12.72□□□□□ -0.37
NKX6-2Q9C056 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
NKX6-2Q9C056 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms