Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 MIR3907-201ENST00000579424 151 ntBASIC16.52■□□□□ 0.24
RAD9AQ99638 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RAD9AQ99638 MIR7845-201ENST00000618396 99 ntBASIC16.52■□□□□ 0.24
RAD9AQ99638 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAD9AQ99638 AC100757.4-201ENST00000626934 759 ntBASIC16.52■□□□□ 0.24
RAD9AQ99638 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAD9AQ99638 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAD9AQ99638 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAD9AQ99638 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAD9AQ99638 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAD9AQ99638 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAD9AQ99638 AC106886.4-201ENST00000623557 2502 ntBASIC16.52■□□□□ 0.23
RAD9AQ99638 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAD9AQ99638 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RAD9AQ99638 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RAD9AQ99638 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
RAD9AQ99638 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAD9AQ99638 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.51■□□□□ 0.23
RAD9AQ99638 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.51■□□□□ 0.23
RAD9AQ99638 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RAD9AQ99638 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAD9AQ99638 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AC004066.1-201ENST00000502488 802 ntBASIC16.51■□□□□ 0.23
RAD9AQ99638 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AC022217.1-201ENST00000521069 738 ntBASIC16.51■□□□□ 0.23
RAD9AQ99638 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AC005730.2-201ENST00000564549 1184 ntBASIC16.51■□□□□ 0.23
RAD9AQ99638 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.51■□□□□ 0.23
RAD9AQ99638 OR10B1P-201ENST00000601666 907 ntBASIC16.51■□□□□ 0.23
RAD9AQ99638 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AC073413.1-201ENST00000603927 732 ntBASIC16.51■□□□□ 0.23
RAD9AQ99638 AL023803.2-201ENST00000620080 638 ntBASIC16.51■□□□□ 0.23
RAD9AQ99638 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.51■□□□□ 0.23
RAD9AQ99638 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.51■□□□□ 0.23
RAD9AQ99638 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 KRT8P14-201ENST00000414254 1442 ntBASIC16.51■□□□□ 0.23
RAD9AQ99638 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAD9AQ99638 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.51■□□□□ 0.23
RAD9AQ99638 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.5■□□□□ 0.23
RAD9AQ99638 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAD9AQ99638 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAD9AQ99638 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.5■□□□□ 0.23
RAD9AQ99638 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.5■□□□□ 0.23
RAD9AQ99638 KRT8P4-201ENST00000509735 1454 ntBASIC16.5■□□□□ 0.23
RAD9AQ99638 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.5■□□□□ 0.23
RAD9AQ99638 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.5■□□□□ 0.23
RAD9AQ99638 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 AL354877.1-201ENST00000424412 413 ntBASIC16.5■□□□□ 0.23
RAD9AQ99638 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.5■□□□□ 0.23
RAD9AQ99638 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.5■□□□□ 0.23
RAD9AQ99638 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAD9AQ99638 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.5■□□□□ 0.23
RAD9AQ99638 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.5■□□□□ 0.23
RAD9AQ99638 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
RAD9AQ99638 AL645939.5-201ENST00000606834 243 ntBASIC16.5■□□□□ 0.23
RAD9AQ99638 AC079336.7-201ENST00000623428 1078 ntBASIC16.5■□□□□ 0.23
RAD9AQ99638 AP001002.3-201ENST00000623482 206 ntBASIC16.5■□□□□ 0.23
RAD9AQ99638 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.5■□□□□ 0.23
RAD9AQ99638 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms