Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NDNQ99608 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.75■□□□□ 0.11
NDNQ99608 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 AC211486.1-202ENST00000416371 468 ntBASIC15.75■□□□□ 0.11
NDNQ99608 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.75■□□□□ 0.11
NDNQ99608 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.75■□□□□ 0.11
NDNQ99608 AC211476.1-201ENST00000503899 468 ntBASIC15.75■□□□□ 0.11
NDNQ99608 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.75■□□□□ 0.11
NDNQ99608 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.75■□□□□ 0.11
NDNQ99608 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.75■□□□□ 0.11
NDNQ99608 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NDNQ99608 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 AC091951.1-201ENST00000512854 2465 ntBASIC15.75■□□□□ 0.11
NDNQ99608 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.75■□□□□ 0.11
NDNQ99608 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NDNQ99608 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.75■□□□□ 0.11
NDNQ99608 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.75■□□□□ 0.11
NDNQ99608 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NDNQ99608 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.74■□□□□ 0.11
NDNQ99608 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.74■□□□□ 0.11
NDNQ99608 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.74■□□□□ 0.11
NDNQ99608 AC007686.3-201ENST00000619017 3487 ntBASIC15.74■□□□□ 0.11
NDNQ99608 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.74■□□□□ 0.11
NDNQ99608 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.74■□□□□ 0.11
NDNQ99608 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.74■□□□□ 0.11
NDNQ99608 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.74■□□□□ 0.11
NDNQ99608 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.74■□□□□ 0.11
NDNQ99608 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NDNQ99608 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
NDNQ99608 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDNQ99608 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
NDNQ99608 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDNQ99608 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDNQ99608 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDNQ99608 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.73■□□□□ 0.11
NDNQ99608 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDNQ99608 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NDNQ99608 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.73■□□□□ 0.11
NDNQ99608 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NDNQ99608 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDNQ99608 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDNQ99608 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
NDNQ99608 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.73■□□□□ 0.11
NDNQ99608 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NDNQ99608 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NDNQ99608 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.73■□□□□ 0.11
NDNQ99608 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms