Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 SEC63P1-201ENST00000425785 1258 ntBASIC15.85■□□□□ 0.13
PHOX2BQ99453 NKAIN1P1-201ENST00000435754 582 ntBASIC15.85■□□□□ 0.13
PHOX2BQ99453 AL139010.1-201ENST00000454878 894 ntBASIC15.85■□□□□ 0.13
PHOX2BQ99453 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 AC120045.2-201ENST00000567334 178 ntBASIC15.85■□□□□ 0.13
PHOX2BQ99453 AP001063.1-201ENST00000568332 529 ntBASIC15.85■□□□□ 0.13
PHOX2BQ99453 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 AC107308.1-201ENST00000615897 301 ntBASIC15.85■□□□□ 0.13
PHOX2BQ99453 AC145423.3-201ENST00000615987 467 ntBASIC15.85■□□□□ 0.13
PHOX2BQ99453 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.85■□□□□ 0.13
PHOX2BQ99453 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.85■□□□□ 0.13
PHOX2BQ99453 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PHOX2BQ99453 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 AC092171.3-201ENST00000610122 2651 ntBASIC15.84■□□□□ 0.13
PHOX2BQ99453 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 RNF216P1-203ENST00000404404 2427 ntBASIC15.84■□□□□ 0.13
PHOX2BQ99453 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 AC044849.1-201ENST00000519737 1188 ntBASIC15.84■□□□□ 0.13
PHOX2BQ99453 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 AC138951.2-201ENST00000623455 1161 ntBASIC15.84■□□□□ 0.13
PHOX2BQ99453 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PHOX2BQ99453 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PHOX2BQ99453 AL589702.1-201ENST00000641229 1509 ntBASIC15.84■□□□□ 0.13
PHOX2BQ99453 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PHOX2BQ99453 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.83■□□□□ 0.13
PHOX2BQ99453 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.83■□□□□ 0.13
PHOX2BQ99453 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PHOX2BQ99453 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PHOX2BQ99453 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.13
PHOX2BQ99453 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.83■□□□□ 0.13
PHOX2BQ99453 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PHOX2BQ99453 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 Z97180.1-201ENST00000445173 988 ntBASIC15.83■□□□□ 0.12
PHOX2BQ99453 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 AC025279.2-201ENST00000569730 653 ntBASIC15.83■□□□□ 0.12
PHOX2BQ99453 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PHOX2BQ99453 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms