Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AP001267.2-201ENST00000532619 2086 ntBASIC14.78□□□□□ -0.04
NR1H4Q96RI1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ACE3P-201ENST00000423435 1973 ntBASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AL590787.1-201ENST00000568856 1315 ntBASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NR1H4Q96RI1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 AC148477.5-201ENST00000625164 1645 ntBASIC14.77□□□□□ -0.04
NR1H4Q96RI1 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.77□□□□□ -0.04
NR1H4Q96RI1 ARMC10P1-201ENST00000313754 855 ntBASIC14.77□□□□□ -0.05
NR1H4Q96RI1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 RN7SL606P-201ENST00000472779 293 ntBASIC14.77□□□□□ -0.05
NR1H4Q96RI1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 AC090616.6-201ENST00000582640 721 ntBASIC14.77□□□□□ -0.05
NR1H4Q96RI1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.77□□□□□ -0.05
NR1H4Q96RI1 Z82170.1-201ENST00000625081 3192 ntBASIC14.77□□□□□ -0.05
NR1H4Q96RI1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NR1H4Q96RI1 AC015818.8-201ENST00000587907 1519 ntBASIC14.76□□□□□ -0.05
NR1H4Q96RI1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 AP001282.1-201ENST00000531301 1499 ntBASIC14.76□□□□□ -0.05
NR1H4Q96RI1 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NR1H4Q96RI1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms