Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 GAPDHP40-201ENST00000505218 1006 ntBASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 AC025279.2-201ENST00000569730 653 ntBASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 AC103810.3-201ENST00000583567 96 ntBASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 AC009542.2-202ENST00000619004 1067 ntBASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SYNGAP1Q96PV0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 AC007950.2-201ENST00000615045 2347 ntBASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 RN7SL560P-201ENST00000577943 264 ntBASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 AP005019.2-201ENST00000615104 511 ntBASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYNGAP1Q96PV0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 RPL13AP20-201ENST00000459725 609 ntBASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 AC099548.2-209ENST00000480264 625 ntBASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 AP001582.1-201ENST00000525856 295 ntBASIC17.68■□□□□ 0.42
SYNGAP1Q96PV0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms