Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 AC107373.2-201ENST00000607735 490 ntBASIC16.92■□□□□ 0.3
PGBD4Q96DM1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PGBD4Q96DM1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 AC132872.4-202ENST00000622924 2756 ntBASIC16.91■□□□□ 0.3
PGBD4Q96DM1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PGBD4Q96DM1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC092933.1-201ENST00000393644 945 ntBASIC16.9■□□□□ 0.3
PGBD4Q96DM1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC007551.1-201ENST00000457394 519 ntBASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PGBD4Q96DM1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PGBD4Q96DM1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PGBD4Q96DM1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
PGBD4Q96DM1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms