Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATP2A3Q93084 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.53■□□□□ 0.24
ATP2A3Q93084 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 HIST3H2BA-201ENST00000436555 524 ntBASIC16.53■□□□□ 0.24
ATP2A3Q93084 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.53■□□□□ 0.24
ATP2A3Q93084 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATP2A3Q93084 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 AC004987.2-201ENST00000395959 1148 ntBASIC16.52■□□□□ 0.24
ATP2A3Q93084 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 IGHV3-71-201ENST00000523324 359 ntBASIC16.52■□□□□ 0.24
ATP2A3Q93084 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 AC132938.2-201ENST00000579188 680 ntBASIC16.52■□□□□ 0.24
ATP2A3Q93084 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.52■□□□□ 0.24
ATP2A3Q93084 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 AL591163.1-201ENST00000641757 987 ntBASIC16.52■□□□□ 0.24
ATP2A3Q93084 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATP2A3Q93084 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A3Q93084 PCDHA3-202ENST00000532566 4594 ntBASIC16.52■□□□□ 0.23
ATP2A3Q93084 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A3Q93084 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.52■□□□□ 0.23
ATP2A3Q93084 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A3Q93084 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A3Q93084 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATP2A3Q93084 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ATP2A3Q93084 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
ATP2A3Q93084 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
ATP2A3Q93084 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATP2A3Q93084 AL592424.1-201ENST00000563624 1536 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms