Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 ELK2BP-201ENST00000415014 1224 ntBASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 AC132008.2-207ENST00000454517 770 ntBASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 KRT18P34-201ENST00000488218 1270 ntBASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 AC089987.1-201ENST00000551654 2209 ntBASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MBD3L1Q8WWY6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 RBM17P3-201ENST00000417687 1192 ntBASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 TSSC2-201ENST00000450217 709 ntBASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MBD3L1Q8WWY6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MBD3L1Q8WWY6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms