Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 OR8S1-201ENST00000310194 1080 ntBASIC18.33■□□□□ 0.52
STAG1Q8WVM7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 AC133539.2-201ENST00000604757 467 ntBASIC18.33■□□□□ 0.52
STAG1Q8WVM7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
STAG1Q8WVM7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 C1QBPP1-201ENST00000400117 770 ntBASIC18.32■□□□□ 0.52
STAG1Q8WVM7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
STAG1Q8WVM7 KRT8P22-201ENST00000562317 1415 ntBASIC18.32■□□□□ 0.52
STAG1Q8WVM7 C18orf15-201ENST00000623680 2534 ntBASIC18.31■□□□□ 0.52
STAG1Q8WVM7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 PPT1-215ENST00000641471 2368 ntBASIC18.31■□□□□ 0.52
STAG1Q8WVM7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 AC093813.1-201ENST00000605066 256 ntBASIC18.31■□□□□ 0.52
STAG1Q8WVM7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 AL033527.5-201ENST00000641382 801 ntBASIC18.31■□□□□ 0.52
STAG1Q8WVM7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.31■□□□□ 0.52
STAG1Q8WVM7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms