Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 MIR1233-2-201ENST00000408138 82 ntBASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 MIR1233-1-201ENST00000408722 82 ntBASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 AL133215.2-201ENST00000609242 977 ntBASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 AC079781.4-201ENST00000641908 219 ntBASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 CETN4P-206ENST00000642099 2168 ntBASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 KRT8P12-202ENST00000472924 1397 ntBASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 C18orf15-201ENST00000623680 2534 ntBASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAF3IP1Q8TDR0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AL079307.3-201ENST00000556114 283 ntBASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AC006486.2-201ENST00000624246 2199 ntBASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP1Q8TDR0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAF3IP1Q8TDR0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAF3IP1Q8TDR0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRAF3IP1Q8TDR0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP1Q8TDR0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP1Q8TDR0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP1Q8TDR0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP1Q8TDR0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP1Q8TDR0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms