Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 REXO1L5P-201ENST00000622260 2098 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AL583805.1-201ENST00000391389 531 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TSPY25P-201ENST00000429463 745 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 MRPL22P1-201ENST00000505398 616 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC012158.2-201ENST00000536546 354 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 INE2-201ENST00000630399 1874 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC004066.1-201ENST00000502488 802 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC244250.3-201ENST00000620749 366 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 RN7SKP109-201ENST00000410592 316 ntBASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 AP000911.2-201ENST00000534330 502 ntBASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
ALMS1Q8TCU4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 HIST2H2BA-201ENST00000412169 381 ntBASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 PUDPP3-201ENST00000445368 636 ntBASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
ALMS1Q8TCU4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 CEP83-AS1-201ENST00000623122 2482 ntBASIC10.2□□□□□ -0.78
ALMS1Q8TCU4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms