Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 AC025048.3-201ENST00000590609 569 ntBASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 AC005702.4-201ENST00000618393 416 ntBASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 AC084364.1-201ENST00000551967 1556 ntBASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMARCC2Q8TAQ2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 AC023024.2-201ENST00000623561 1993 ntBASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SMARCC2Q8TAQ2 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AC148477.4-201ENST00000613430 1793 ntBASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AL035633.1-201ENST00000406139 838 ntBASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AC114501.2-201ENST00000439631 535 ntBASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 SPTLC1P1-201ENST00000447199 261 ntBASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.27■□□□□ 0.52
SMARCC2Q8TAQ2 AC104794.3-201ENST00000566840 1248 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms