Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 AC117489.1-201ENST00000625169 3217 ntBASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIML2Q8N7C3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 AC018845.2-201ENST00000568326 409 ntBASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
TRIML2Q8N7C3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIML2Q8N7C3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 PDPK2P-202ENST00000562415 1191 ntBASIC15.2■□□□□ 0.02
TRIML2Q8N7C3 AC034105.1-201ENST00000563488 319 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms