Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.84■□□□□ 0.13
SYNPOQ8N3V7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SYNPOQ8N3V7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
SYNPOQ8N3V7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
SYNPOQ8N3V7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SYNPOQ8N3V7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.83■□□□□ 0.13
SYNPOQ8N3V7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
SYNPOQ8N3V7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 AC244452.3-201ENST00000636814 210 ntBASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SYNPOQ8N3V7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 GAPDHP40-201ENST00000505218 1006 ntBASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 AC106872.11-201ENST00000605838 421 ntBASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 AC138951.2-201ENST00000623455 1161 ntBASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SYNPOQ8N3V7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms