Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 ENPP7P5-201ENST00000541031 1031 ntBASIC16.61■□□□□ 0.25
RNF135Q8IUD6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 DUX4L45-201ENST00000566406 1057 ntBASIC16.61■□□□□ 0.25
RNF135Q8IUD6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 AC015967.2-201ENST00000624092 234 ntBASIC16.61■□□□□ 0.25
RNF135Q8IUD6 AC006435.4-201ENST00000625037 234 ntBASIC16.61■□□□□ 0.25
RNF135Q8IUD6 AL356737.1-201ENST00000634391 234 ntBASIC16.61■□□□□ 0.25
RNF135Q8IUD6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.6■□□□□ 0.25
RNF135Q8IUD6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 MIR326-201ENST00000362220 95 ntBASIC16.6■□□□□ 0.25
RNF135Q8IUD6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 FXNP2-201ENST00000411625 547 ntBASIC16.6■□□□□ 0.25
RNF135Q8IUD6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AC016694.1-201ENST00000434179 700 ntBASIC16.6■□□□□ 0.25
RNF135Q8IUD6 MPRIPP1-201ENST00000452433 1089 ntBASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 AC063926.3-201ENST00000624734 5658 ntBASIC16.6■□□□□ 0.25
RNF135Q8IUD6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 TSPY26P-202ENST00000565928 3884 ntBASIC16.6■□□□□ 0.25
RNF135Q8IUD6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF135Q8IUD6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 HIST3H2BA-201ENST00000436555 524 ntBASIC16.59■□□□□ 0.25
RNF135Q8IUD6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF135Q8IUD6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms