Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK2Q86Y07 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK2Q86Y07 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
VRK2Q86Y07 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.49□□□□□ -0.09
VRK2Q86Y07 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
VRK2Q86Y07 CETN4P-206ENST00000642099 2168 ntBASIC14.49□□□□□ -0.09
VRK2Q86Y07 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VRK2Q86Y07 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.49□□□□□ -0.09
VRK2Q86Y07 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 AC004967.1-201ENST00000453589 447 ntBASIC14.48□□□□□ -0.09
VRK2Q86Y07 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 AC126755.1-201ENST00000525846 6405 ntBASIC14.48□□□□□ -0.09
VRK2Q86Y07 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.48□□□□□ -0.09
VRK2Q86Y07 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
VRK2Q86Y07 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 CICP24-201ENST00000605464 2705 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 AC074338.1-201ENST00000416825 156 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 AL080243.2-201ENST00000418783 582 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 AC109322.1-201ENST00000524499 1264 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 AC069262.1-201ENST00000539058 672 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 AL512356.2-201ENST00000546955 174 ntBASIC14.47□□□□□ -0.09
VRK2Q86Y07 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.47□□□□□ -0.09
VRK2Q86Y07 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VRK2Q86Y07 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms