Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRTM1Q86UE6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 AC079776.4-201ENST00000511039 504 ntBASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 AC068137.2-201ENST00000605408 478 ntBASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 AC079781.5-202ENST00000641784 3743 ntBASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.62□□□□□ -0.23
LRRTM1Q86UE6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 AC002056.1-201ENST00000395613 760 ntBASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 RPL5P21-201ENST00000404620 815 ntBASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 AC142381.1-201ENST00000426099 345 ntBASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 RNA5SP419-201ENST00000515908 135 ntBASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 RNA5SP410-201ENST00000516285 106 ntBASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 AL607033.1-201ENST00000623900 1599 ntBASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRRTM1Q86UE6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms