Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 VDAC1P1-201ENST00000439229 848 ntBASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 POU5F1P2-201ENST00000521750 823 ntBASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 AC026803.1-201ENST00000569130 274 ntBASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C9orf50Q5SZB4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 AL109837.1-201ENST00000603272 613 ntBASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 AL132780.4-201ENST00000624870 1135 ntBASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 FKBP4P6-201ENST00000457486 1332 ntBASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C9orf50Q5SZB4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
C9orf50Q5SZB4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 ALG1L13P-202ENST00000519320 584 ntBASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 AL022344.2-201ENST00000568976 968 ntBASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 AC008805.1-201ENST00000590892 364 ntBASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 MIR6858-201ENST00000620733 67 ntBASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.39■□□□□ 0.21
C9orf50Q5SZB4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C9orf50Q5SZB4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
C9orf50Q5SZB4 AL133373.2-201ENST00000623187 2828 ntBASIC16.38■□□□□ 0.21
C9orf50Q5SZB4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
C9orf50Q5SZB4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms